Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913183.1_cds_XP_016463242.1_56381
CDS Infomation

[gene=LOC107786296] [db_xref=GeneID:107786296] [protein=phospholipase A1-IIdelta-like] [protein_id=XP_016463242.1] [location=join(22296..23524,24644..24866)] [gbkey=CDS]
Sequence

ATGGAGACAGAACCAACATGGCATGAATTATTAGGAAGCAACAACTGGGAAAGTCTTCTT
GATCCATTAAACCTCCATCTCCGGCGACTGATTCTCCGGTGCGGCGACTTTTGTCAAGCA
ACTTACGACGCTTTCAACAATGACCAAAACTCCAAGTACTGTGGCAGTAGCCGCTACGGC
AAAAATTCATTTTTCCACAAAGTCATGTTCGAATCGGCTTCAGATTACAAAGTCTACAGT
TTCCTTTATGCCACTGCTCGTGTTGGTGCACATAAAGCACTTTTCCTCCACTCTCTGTCT
CGTGAATCTTGGGATCGTGAGTCTAATTGGATTGGCTATATAGCTGTAACGAATGATGAA
GTTAGTGAAAATCTGGGTCGTCGGGAAATTTATATAGCTTTTCGTGGTACAACGAGAAAT
TATGAATGGATTAATGTTCTTGGTGCTAAGCCAGAATCTGCTGGTCCTTTGCTTCACCCG
AAATCGCTAAATAAAGCTGAATTAGACGATGGCGATGGAGGTAACGTCGATGATGATGAT
GAAAACGCGCCTAAAGTAATGAATGGGTGGCTCAAGATTTATGTTTCAAGTGACCCAAAT
TCGCCCTTTACGAGATTAAGTGCTAGAGCACAGCTTCAGACTATGATTGAAGATTTAAGA
GAAAAATATAAGGATGAGAATTTGAGTATAACTTTTACAGGGCATAGTCTTGGTGCTAGT
TTATCAATTTTAGCAGCTTTTGATCTTGTTGAAAATGGGGTCACTGATATTCCAGTTTCG
GCTATTATTTTTGGTAGTCCACAAGTAGGGAACAAAGCTTTTAACGAAAGGCTAAAGAAG
TTTCCCAGTTTGAAAATCTTGCATGTTAAAAACAAGATTGATCTTATAACTCATTATCCA
AGTTCTTTATTGGGGTATGTTAATTCAGGGATTGAGTTAGTGATTGATACTAGAAAATCT
CCAAGTTTAAAGGACACGAAAAATCCAAGTGATTGGCATAATTTGCAAGCAATTTTACAT
ATTGTAGCAGGTTGGAATGGGGAAGGCGAAGAATTTGAGCTGAAAGTGAAGAGAAGTTTG
GCTTTAGTGAACAAGTCAAGTTCTATATTGAAAGATGAGATCTTGATTCCTGGATCGTGG
TGGGTTGAGAAGAACAAAGGGGTTGTTCTTGCTGAAGATGGAGAATGGATTCTTGCACCA
CCTTCAGATGAGGACATTCCAATTCCTGAGGTTTATTCACTGGAAAATGATGCTATAAGT
GGAGGAGTACCATGGCCCCCTATGGGCGTAGAAGATGGAATAACATCAATTCCTGAAGAT
GAAATTGAGGAGCACACACACATTGCTCTTCTAAATGATTCTCGTTTCCTCATCCAAAAA
ACCAAAGCAGTATTCAAACAGACTTATAAAGAAGGTCACTTTATGTTTAGAACATTTGGA
AAACATGGATAA

Peptide Sequence

PEP ID

XP_016463242.1
PEP Infomation

PREDICTED: phospholipase A1-IIdelta-like [Nicotiana tabacum]
Sequence

METEPTWHELLGSNNWESLLDPLNLHLRRLILRCGDFCQATYDAFNNDQNSKYCGSSRYG
KNSFFHKVMFESASDYKVYSFLYATARVGAHKALFLHSLSRESWDRESNWIGYIAVTNDE
VSENLGRREIYIAFRGTTRNYEWINVLGAKPESAGPLLHPKSLNKAELDDGDGGNVDDDD
ENAPKVMNGWLKIYVSSDPNSPFTRLSARAQLQTMIEDLREKYKDENLSITFTGHSLGAS
LSILAAFDLVENGVTDIPVSAIIFGSPQVGNKAFNERLKKFPSLKILHVKNKIDLITHYP
SSLLGYVNSGIELVIDTRKSPSLKDTKNPSDWHNLQAILHIVAGWNGEGEEFELKVKRSL
ALVNKSSSILKDEILIPGSWWVEKNKGVVLAEDGEWILAPPSDEDIPIPEVYSLENDAIS
GGVPWPPMGVEDGITSIPEDEIEEHTHIALLNDSRFLIQKTKAVFKQTYKEGHFMFRTFG
KHG

Transcript Sequence

Gene sequence data has not been registered.